Adeno-Associated Virus (AAV) Testing
Critical Quality Attributes
Assay
Description
Identity
Capsid Identity
Confirm the identity of the AAV capsid serotype using ELISA or Jess or CE-SDS
Sequence Confirmation
Verify the sequence of AAV genome by Sanger Sequencing or NGS
Identity
Capsid Identity
Confirm the identity of the AAV capsid serotype using ELISA or Jess or CE-SDS
Long Read NGS
Sequence AAV genome by long read Nanopore sequencing
Purity
Residual Plasmid DNA
Quantify residual host cell DNA using qPCR or ddPCR.
Capsid content (empty/full ratio)
Measure the percent of full to empty capsids by CE-SDS
Capsid purity Analysis
Assess the purity of AAV capsid proteins using CE-SDS or Jess
Purity
Residual Plasmid DNA
Quantify residual plasmid DNA using qPCR or ddPCR.
Residual host cell DNA
Quantify residual host cell DNA using qPCR or ddPCR.
Residual Host Cell Protein
Determine presence and quantitate residual host cell proteins by ELISA
Potency
Vector Genome Titer
Quantify the number of vector genomes using qPCR or ddPCR.
Cell-based assay
Develop cell-based assay for evaluating post-transduction endpoint (mRNA expression, protein production)
Genetic Integrity
Vector Genome Integrity
Confirm the integrity of the vector genome using QPCR/ddPCR or Bioanalyzer or CE
Safety
Bioburden
USP <61>
Endotoxin
USP <85>
Safety
Bioburden
USP <61>
Sterility
USP <71>
Other
pH
USP <790>
Osmolality
USP <791>